CDS

Accession Number TCMCG018C13403
gbkey CDS
Protein Id XP_011649103.1
Location join(9136745..9136813,9137194..9137316,9137750..9137907,9139782..9139826,9141901..9141979,9142072..9142145,9142686..9142792,9143571..9143753,9144753..9144956,9145352..9145565,9145660..9145734,9145813..9146141,9146436..9146628,9146740..9146992,9147071..9147398,9147773..9147953,9148068..9148208,9148367..9148628,9149051..9149509,9149955..9150418,9151054..9151190,9151288..9151469,9151595..9151984,9152457..9152582,9152897..9152962,9153050..9154812,9154897..9155176,9156599..9156838,9157844..9158365,9158449..9158581,9159344..9159600)
Gene LOC101208309
GeneID 101208309
Organism Cucumis sativus

Protein

Length 2678aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA182750
db_source XM_011650801.2
Definition small subunit processome component 20 homolog isoform X1 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACGGCTTCTCACGCACAAGCTGTCAAGTCTCTCAACAAGTCCCCTGGTCGCCGACGTTTTGTTTTCCAGACATTCTCCCAAAGAGTACAAGAAATTGACATTGATGTATACAGAAGCCTTGATAAAGTTAAGTCTGAGCCGTCCGAGGGATCCTCCTTTTTTCGGGACTGCCTTATAGAATGGAGGGAATTAAATACTGCTGAGGATTTTATTTCTTGTTACGAGGAAATTATTCCATTGGTACAAACATTACCACTGGTGATACTGCACAAGGAGTCTATATTCTCAAATCTTCTTTCTAGAGTACAGATAAAAGCAAGGCTATCCCTTGAGCCTATATTGAGGTTGATTGCGGCATTAGCAAGAGATCTGTTGGAGGACTTTTTGCCATTCCTGTCTCAATTAACTGATGCATTGGTGTCTCTTCTAGAAGGTGGTGCAGCTAGGGAGCCAGAAATTATTGAGCCGATTTTTACATCATGGTCATATATAATGATGTACTTGCAAAAATATCTTACACGAAATATTACTGATTTGCTAAGGGTTACAGTGTCCTTGAGATATTACTCTAAAGATTACATTCAAGATTTCATGGCTGAGGCGACATCATTCTTGCTAAGGAATGCACCAGTTGATCAGCTAAAAAATGGAATTAAACGGATAATATTGGAAGTTGTTAAAAAACCTCTTGCTACAAGAGAATATGGCACTAGTGCTCTGCTATTTCACACCATGAGAGGAACCTCATCAAGGTTTCATTCAAGAGCAGAGCTGGTGTTTCGCTTTTTGATTAGTGGTCCAATATTTGAAATTGGCCGAGACTCCAGCCAAGGTTCAGATGCCATTTTAGAAGTGTTAAAGTGTGTGTGTCAGAGATTATGTGAAGAAATGGATCCCCAGGAATTGGAGGTGATATGGAAATGCTTGTTTGAGGAAATAACAGTTGCCATTTCTAATGATTACATGGTTCATATAAATCACCTGTTGATGCTTCTTGCTTCAGCAGCTCAGAATGTGAATTGGAAAAAACTTCACGATTATAAACCAATGCTCGAACTTGTAGACTTACTTGTGATGAAATTTGCCACAACTCCAAGCCTTACAGTGGATGATGATTTATCCAGCCTTGTTGATACAATTTTGCAATTAATGTTAGTTATTCTTGAAGGTCTTCAAAATTCTGAGGACTTTCTATGTATTTCTGGTTGCTCATTGCGTTGGGCTCCAATATTTCAATTAAACAACAGTAGTTTATTAACTTTTGTACGAGAAGTAATGGAGAAGGACACTAGTGTACTATGTGCATTCAGAACTAACATTTTAAGAGTGATGAATGAATCGTTAGAATCTTCACCCGAAGAAGTTATTTATCTGCTGCTTTCCTTTAGTGAGAGATTACCAACAGAAGTGTTAGGTACATCAGAAGAGGAAATTCCAAAGATTAATAATTTTATCCTAAAAATCCTTCGCCAGTGGATAAAAGAGATCACTGATTTTGTGCAACACAGTTCGTCAACTATTGATATTAATGAATCTAAATTGGCTACTTTTTGGGGTGTTGTTCGTTGTTGCCCATATATTCTAAAATTCCAAGCTAGTTCATCCTTACTAGTGGAGTTGATTGATGCACTTGACCGGCTTTGTACTCTTGAAGGTGACATCTTTGGAATCCCTAAAGAAAAGTTGGAAAGCATAATTGGTGCCACCATAGGTTCTTACCTTAAGTTGCTCTCTAGTGAGAAGGCTGGGCTTGAAGAATTAAGCAGACTTGTGTACCTTGCCAAAAGATATAGCTCATGTTCACAAGTCTTGGTAGCTGTAGCTGATTATTTGGATTTTATTTATGGGCCTGCATTGGAAGCTGACATCAGTAAAAGAATCTATTCTGAAGAGTTTCAAGCAGACAAGGTTGAGGATGCAGTACAGGTGTTTGCAGATAATTTGCGTCACTCAGATAAGGGGGTTCGTTTATCTACTCTCAGAATATTGTGTCACTATGAGCCTTTGCAGTCTGCTACTCTTACAAAGGAATCTTCCATTGATAATGAGATGGAAGCTGAAAATTTGGAACCATATTCTGATGATTTAGTAGGCAGTGAGGTCCTTCGTCTACTTCTCTCTGTTGAATCAACATCTACTTCAATATCTACCAGCCGAAAGATTATATTATTTATCTCTGGAGTGCAGAGGGCCTTGATGGCTGAAGGAATACCTGAGGCTTACTTATTGGTTGCTTTAAATGGGATTATTGGCATTTTCCAAAACCGCTTTAGCTATATTTGGGATCAAGCATCTGAATGTCTTGCCTCTTTAATCAGAAATCACTCGGAATTTGTGTGGGATAAACTGATCTGTTATTTTCAGCAGTGGTTATGTCTACTTGATCAACCGGGCAGAGATACTGCTGAATCATCTGATGAATTAAATGATCTAGTCAGATGTTTCCGCTCATTCGTTGTTCCTTCAACAGACAGTACACCACTCTTTACTCTGTTATCCTTAGTGCTTCAATCATTACAAAAAAATTCGACCATCGTTGAATCTCAGTCTCAACGGATGTTGCCTCTGTTCTTAACATTTTTAGGCTACAGCACTGGTCATGTGGATAGTGTGGATTCGTTCAAACAATATGCATGCAAAAGCAAAGAGTGGAAATGTGTTCTGAAGGAGTGGTTAAACTTGCTGAGGAAAACCCGGAACCTGAAGTCTTTTCACAAGAGTGACTTTCTTAAGGAAGTTCTGGAGCAAAGGCTTTTGGATGATAATGATGCTGAAATACAAAGCAAGGTCCTTGATTGCCTCTTAATGTGGAAAGATGATTTCTTGATCTCACATGAACAACATCTAAAAAACATCATCTCCCCCAAGACTTTGAGAGAAGAACTTACAAGGTGGAGCTTGTCAAAAGAAAAGAATCAAATTGATGAAAGACACAGACCTAAGCTTGTACCTTTAGTTACTCGCTTATTGATGCCAAAAGTTAGAAAATTGAAGGTTCTTGGTTCCCGCAAGCAAGCAAGTGTAAATCTTCGAAAAGCCGTCCTCCAGTTCATTGCACAACTTGATACAGTTGAGCTTCCACTTTTCTTTTCCCTGTTATTGAAGCCTTTGAACATTATTCCAAGGGAAGCTGATGCAACTGCTAACTGGTTTTCTAACTTACACCTAGTTTCAATGAAAGCGTCAGCAACTAACATCTTGAAGTACTTCTCAACAGAAAGTATAGTTGCATTGTCATGGAAGAAGAAATATGGTTTTATGCATGTTATTGAAGAAGTTCTTGCTGTTTTTGATGAAATGCTTATTAGTCCATTTCTCAATATAATATTGGGTTGTGTTGTCCGAATTTTGGCAAGTTGCACATCAAGTCTTCATGCGGCAAGGCATAATGAAATGTCTTTATCTGAAATTGGAAAGACATGCAACAAGAATTCACTTGAAATGAATAAAGAAGCAGCATTCCCTGGCCTGACCTATACAGCTGTGAAGCAGCACAAAGATTTAAGGTCTTTATGTCTCAGAGTCATTTCAGTCGTTCTTTACAAGTATGAGGATTTTGATTTTGAAATGGAATTCTGGGACCTATTTTTTACGTCTGTGAAATCTTCAATCGAAAGTTTCAAGCATGAGGGCTCAAGCAGTGAAAAGCCAAGTTCACTTTGCTCTTGCTTTCTTGCCATGAGTAGAAGCCACAAACTTGTGCCACTGTTGGCTAGAGAGAGAAATCTAGTTCCTGATATCTTTTTCATCCTCACTATCTCGGCAGCATCTCAACCCATTATATTGTTTGTACTTCAGTTTATTGAAAACTTGTTGAGTTTTGATGGTGAGTTGGATGGCAATGATAGTGCCGTGAGAAGCATTTTACATCCAAATCTTGATTCCCTTGTTCAAAGCTTGCATGTTCTTTTCCAAAGTGGTGATGCGAAAAAGAGGAAATTGATAGAACACCTCAATGGACCAATGATAAGAATTTTCAAATTACTCTCGAAGGTTGTAAGGGACCAATTGCATGCTAAGAAGTTTGTAGAAATCATACTCCCATGCTTATCTCAGACTGGTCGTAGTTCTGAATTTTATGCTAATACTCTACAAGTGGTACAAAATGTGGTTCCCATTCTAAGGAGCGAGAGTACAACAAAAATCTTGAAAGCAGTTTCTCCGTTACTGATTTCTGTTGAGCAAGATCTGCGTTTGCTTGTATGTGATCTTATCAATGCTCTTGCAGAAGTTGATTCTTCCATCCTCTGTGTGGCTCAAATCATCCGTGGTTTAAATGCAACCTCTGCTATGGAAATTGGAGGACTTGATTTTGATACAATTGTTAATACTTACGAAAAAATTAGTGTTGATTTTTTCTGTGCTACCTCAGAAGAACATGCATTAGTTGTTCTATCGCAGTGCATGCATGATATGTCATCAGAGGAACTAATCCTAAGACATAGTGCTTATAGGTGTTTGCTCTCTTTTGTCGAATTTTCTTCTTCAGTTCTTGGTCAAGGAGGGATCAGTCACCAAGAATCAAGTGACAATATCACATTGTACGATAATAGTTGGTCAAAAGAAAGCATCATGCGGCTAACAAACAAATTTATTTTTAAGCACATGGGGGAAGCAATGAACAGGGAGACCTCAGTTAAAAAGGAGTGGATAAATTTATTGCGAGAAATGGTGTTGAAATTTCCTGATGTAGCCAACTTAAGTTCGCTGAAGGCATTATACAGTAAAGATGCTGAAATTGATTTTTTCAGTAACATTACCCACTTGCAGAAACTTAGAAGAGCAAAGGCATTAATTCGCTTCAAAAATACAATTCCTACTGTCAACATGCCCGAGGTTATAACAAAGAATGTCTTTGTGCCACTGTTCTTCAATATGCTGTTTGATTTACAAGAGGGTAAAGCAGAGAATATTAGAGTTGCTTGCATAGAAGCGCTTGCTTCAATTTCTGGTCAAATGGAATGGAAGTCATATTTTGCTCTATTAAGAAGATGCTTACGGGACCTTACTAAACATCCTGATAAAAAAAAGGTTCTGATGCGGTTGATATGCTGTATTTTGGACAACTTCCATTTTCAAGAGAATATTTCAGACGTTGGGTCAACACAATTATATGGCAGTGTGGTTGTGATGAACAATATGCAAGTATGCCTTAGTAAAGATGTGTTCCCAAAGATACAAAAATTTATGAACTCTCAGTCGGAAAGAGTTGATATTTATGTCCATCTTGCTGCGCTAAAGGTGTTGAAATTACTTCCTGCAAATGTTATGGATTCACAACTTTTGAGCATCATCCAGCATATTGTGAACTTTTTGAAGAACCGCTTAGAAAGTGTACGTGATGAAGCTAGATCTGCACTGGCTGCTTGTTTGAAGGAACTTGGATCTGAATACTTGCAGGTTGTAGTTAGGGTTCTGAGAGGATCCTTAAAACGTGGTTACGAGATGCATGTGCTAGGGTATACACTCAATTTTTTATTGTCTAAGCTCTTTACCGGCCCAGCCACTGGGAAGATAGATTATCTTTTGGATGATCTCATTTCTGTAGCAGAGAAAGACATCCTTGGAGAGGTTGCTGAAGAAAAAGAGGTTGAAAAGTTGGCCTCGAAAATGAAAGAGACAAGGAAACAGAAGTCCTTTGACACCCTGAAATTGGTAGCTCAAAGCATAACATTTAAAAGCCACGCACTTAAGCTCCTTAGACCTGTTACTGATCATATGAAGAAGCATCTGACCCCAAAAGCTAAAACCAAATTGGAAAATATGCTATCTAGTGTAGCTGCTGGTTTTGAAAGTAATCCTTCCGTCAATCAAACTGACCTCTTAGTCTTCAACTATGGCCTCATTAAAGATGGAATAAAAGTTGAAAATGGACAGGGTGGAATCTCATCGTTGGTTGATGCAAACAAACATTCAAGAGATGTCTCTAGAGGAAAGAACTTTTCGTGTCAGACAATACTTGCTAAGGCACCATGTTCACACCTTATTATGGTGTTTGCACTTAAGCTTCTGCATGGGTACATGAAAAAGATGCAACTTGGGAAAGGTGATGCTCAGTTGCTAGCAATGCTCGACCCTTTTGTTCTCTTATTAGGAGACTGCTTGACTTCTAAATATGAGGATGTTTTATCATTAACTCTTAGATGTCTCACTCTATTGCTAAGATTGCCTTTGCCATCTGTCAAATCCCAAGCTGACAAAATCAAGGGAGTAGTGTTGCTTATTGCTCAGAGTTCAGTAGACCCACGCAATCCGTTAGTGGAATCGTGTTTGAGATTGTTAACTGTGCTTCTGCGAAATGAGAAAGTTACACTCTCCACAGATCAGCTACACTTATTAATTCAGTTTCCGCTGTTTGTTGATATTGACAAAAATCCATCTTTTGTTGCCCTTTCACTTTTGAAGGCAATTGTAAGTCGGAAGCTTGTTGTCCCTGAGATATATGATCTTGCTATTCGGGTAGCAGAATTGATGGTGACAAGTCAAGTCGAACCAATTCGGAAGAAATGTGGCAAAATCTTACTACAATTTCTGCTTGATTATCATCTTTCAGAAAAGCGGTTGCAGCAACATTTAGATTTTTTGCTCTCAAATTTAAGGTATGAGCATTCAACAGGAAGAGAAGCTGTTTTGGAGATGCTTCACGCAACTGTAGTTAAATTTTCAAAAAGTGTGGTGGATAGTATTTCTGAGACATTATTTTTTCATTTGGTGGCTTGCTTGGCTAATGATCAGGATCATCATGTTCGGTCTATGGCTGGTCTCGTAATAAAGAGCCTGATAGATCGCATAAGCCCAGGTCCTCAACATAATATACTTGAGTCCAGTCTATCTTGGTACTCGGAAGGAAAGCAGCAATTGTGGAGTGTTGCAGCACAGGTGTTGGGATTACTAGTTGAAGTTGAAGCTTTAAAGGAAGCTTTTGAAAGACGTATCCAAACTGTGTTGCTGGTTGCCAGGGGAATTTTGCAGTCTGTTGTTGATGTTTCCATGAGTGAGCAAATAGACATGTACGCAGAGAGTACCATTACCTTTTGGAAGGAGGCATATTATTCGTTAGTGATGCTAGAGAAGTTGATGCACCAATTCCCTCAGTTATTCTTTGAGAATGATTTTCAAGATATATGGGAAATGATTAGTCACCTGCTTCTTTATCCACACATGTGGATACGTAGCATCTCAAATCGCCTGATAGCATCGTACTTCAGGAAGATTGTGATTGAGAATAGCGGAAGGACTTCAGAAAGATCGCTTGGAGCCTATTCTCTTATGAAGCCAAGTAGACTCTTCTTTATTGCTACCTCCTTTTGCTGCCAGTTGAAGTCACAACTTACGGATAAAGATGCTGATTTGATCGAACAAAACCTTGTTTTTGCTATTCGTGGTTTGCATTCTGTCATCGGAGAAGTGGAGAATGTTGACTCGTATCCATTCTGGTCTACACTGGAAGAATCCGAGCAACGACTTTTTCTCAAAGCATTCCAGTTGCTTGACTCTGAAAAAGGAAAAAGCATGCTTTTACCTCATATGACTGGGGTATTTAACCAAAATGATGCTGGTCCTGAGCAGATCCGTCGCCTTCTCATCTCAAACTTGATCAAACAGATGGGGAAGGTTGCTCTTCAAACGGATACTATACAGATGACAGTTGTTTTCAATGTCTTTCGCAATATATCATCACAAATCAGCATAGAAGATTGTGAACGATATGTTTTTGAAATCTTGTTGCCTTTATATAGAGTCCGTGAAGGATTTTCTGGAAAAGTGATCCCAGAATCAATGATACAGTTGGCCCAAGAAGTGTGTGATAAAATACAGAATTGTTTGGGGATTCAGAAATTTGTACAGGTGTACAGCCAGATCATGAAGAGTCTGAAGACCAAAAGGGACAAGAGGAAGCAAGAAGAGAAGCGGATGGCTGTCATTAATCCTATGCGAAATGCGAAAAGGAAACTTCGTATTGCGGAAAAGCAACGCTCCAGTAAGAGAAGGAAGATAACAACAATGAGAATGTCAAGAAGAATGTTGTAG
Protein:  
MATASHAQAVKSLNKSPGRRRFVFQTFSQRVQEIDIDVYRSLDKVKSEPSEGSSFFRDCLIEWRELNTAEDFISCYEEIIPLVQTLPLVILHKESIFSNLLSRVQIKARLSLEPILRLIAALARDLLEDFLPFLSQLTDALVSLLEGGAAREPEIIEPIFTSWSYIMMYLQKYLTRNITDLLRVTVSLRYYSKDYIQDFMAEATSFLLRNAPVDQLKNGIKRIILEVVKKPLATREYGTSALLFHTMRGTSSRFHSRAELVFRFLISGPIFEIGRDSSQGSDAILEVLKCVCQRLCEEMDPQELEVIWKCLFEEITVAISNDYMVHINHLLMLLASAAQNVNWKKLHDYKPMLELVDLLVMKFATTPSLTVDDDLSSLVDTILQLMLVILEGLQNSEDFLCISGCSLRWAPIFQLNNSSLLTFVREVMEKDTSVLCAFRTNILRVMNESLESSPEEVIYLLLSFSERLPTEVLGTSEEEIPKINNFILKILRQWIKEITDFVQHSSSTIDINESKLATFWGVVRCCPYILKFQASSSLLVELIDALDRLCTLEGDIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLDFIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCHYEPLQSATLTKESSIDNEMEAENLEPYSDDLVGSEVLRLLLSVESTSTSISTSRKIILFISGVQRALMAEGIPEAYLLVALNGIIGIFQNRFSYIWDQASECLASLIRNHSEFVWDKLICYFQQWLCLLDQPGRDTAESSDELNDLVRCFRSFVVPSTDSTPLFTLLSLVLQSLQKNSTIVESQSQRMLPLFLTFLGYSTGHVDSVDSFKQYACKSKEWKCVLKEWLNLLRKTRNLKSFHKSDFLKEVLEQRLLDDNDAEIQSKVLDCLLMWKDDFLISHEQHLKNIISPKTLREELTRWSLSKEKNQIDERHRPKLVPLVTRLLMPKVRKLKVLGSRKQASVNLRKAVLQFIAQLDTVELPLFFSLLLKPLNIIPREADATANWFSNLHLVSMKASATNILKYFSTESIVALSWKKKYGFMHVIEEVLAVFDEMLISPFLNIILGCVVRILASCTSSLHAARHNEMSLSEIGKTCNKNSLEMNKEAAFPGLTYTAVKQHKDLRSLCLRVISVVLYKYEDFDFEMEFWDLFFTSVKSSIESFKHEGSSSEKPSSLCSCFLAMSRSHKLVPLLARERNLVPDIFFILTISAASQPIILFVLQFIENLLSFDGELDGNDSAVRSILHPNLDSLVQSLHVLFQSGDAKKRKLIEHLNGPMIRIFKLLSKVVRDQLHAKKFVEIILPCLSQTGRSSEFYANTLQVVQNVVPILRSESTTKILKAVSPLLISVEQDLRLLVCDLINALAEVDSSILCVAQIIRGLNATSAMEIGGLDFDTIVNTYEKISVDFFCATSEEHALVVLSQCMHDMSSEELILRHSAYRCLLSFVEFSSSVLGQGGISHQESSDNITLYDNSWSKESIMRLTNKFIFKHMGEAMNRETSVKKEWINLLREMVLKFPDVANLSSLKALYSKDAEIDFFSNITHLQKLRRAKALIRFKNTIPTVNMPEVITKNVFVPLFFNMLFDLQEGKAENIRVACIEALASISGQMEWKSYFALLRRCLRDLTKHPDKKKVLMRLICCILDNFHFQENISDVGSTQLYGSVVVMNNMQVCLSKDVFPKIQKFMNSQSERVDIYVHLAALKVLKLLPANVMDSQLLSIIQHIVNFLKNRLESVRDEARSALAACLKELGSEYLQVVVRVLRGSLKRGYEMHVLGYTLNFLLSKLFTGPATGKIDYLLDDLISVAEKDILGEVAEEKEVEKLASKMKETRKQKSFDTLKLVAQSITFKSHALKLLRPVTDHMKKHLTPKAKTKLENMLSSVAAGFESNPSVNQTDLLVFNYGLIKDGIKVENGQGGISSLVDANKHSRDVSRGKNFSCQTILAKAPCSHLIMVFALKLLHGYMKKMQLGKGDAQLLAMLDPFVLLLGDCLTSKYEDVLSLTLRCLTLLLRLPLPSVKSQADKIKGVVLLIAQSSVDPRNPLVESCLRLLTVLLRNEKVTLSTDQLHLLIQFPLFVDIDKNPSFVALSLLKAIVSRKLVVPEIYDLAIRVAELMVTSQVEPIRKKCGKILLQFLLDYHLSEKRLQQHLDFLLSNLRYEHSTGREAVLEMLHATVVKFSKSVVDSISETLFFHLVACLANDQDHHVRSMAGLVIKSLIDRISPGPQHNILESSLSWYSEGKQQLWSVAAQVLGLLVEVEALKEAFERRIQTVLLVARGILQSVVDVSMSEQIDMYAESTITFWKEAYYSLVMLEKLMHQFPQLFFENDFQDIWEMISHLLLYPHMWIRSISNRLIASYFRKIVIENSGRTSERSLGAYSLMKPSRLFFIATSFCCQLKSQLTDKDADLIEQNLVFAIRGLHSVIGEVENVDSYPFWSTLEESEQRLFLKAFQLLDSEKGKSMLLPHMTGVFNQNDAGPEQIRRLLISNLIKQMGKVALQTDTIQMTVVFNVFRNISSQISIEDCERYVFEILLPLYRVREGFSGKVIPESMIQLAQEVCDKIQNCLGIQKFVQVYSQIMKSLKTKRDKRKQEEKRMAVINPMRNAKRKLRIAEKQRSSKRRKITTMRMSRRML